Best Claude Code MCP Servers for Biology Medicine And Bioinformatics

MCP server for spatial transcriptomics analysis with 60+ integrated methods covering cell annotation, deconvolution, spatial statistics, and visualization.

Biomedical research MCP server providing access to PubMed, ClinicalTrials.gov, and MyVariant.info.

MCP server to interact with the UCSC Genome Browser API, letting you find genomes, chromosomes, and more.

An MCP server that provides access to medical information, drug databases, and healthcare resources. Enables AI assistants to query medical data, drug interactions, and clinical guidelines.

MCP server to interact with the BioThings API, including genes, genetic variants, drugs, and taxonomic information.

MCP server providing a powerful bioinformatics toolkit for genomics queries and analysis, wrapping the popular `gget` library.

MCP server for a queryable database for aging and longevity research from the OpenGenes project.

MCP server for the SynergyAge database of synergistic and antagonistic genetic interactions in longevity.

Map clinical terminology to OMOP concepts using LLMs for healthcare data standardization and interoperability.

An MCP server that provides access to exported data from Apple Health. Data analytics included.

MCP Server that connects AI agents to FHIR servers. One example use case is querying patient history in natural language.

Model Context Protocol server for Fast Healthcare Interoperability Resources (FHIR) APIs. Provides seamless integration with FHIR servers, enabling AI assistants to search, retrieve, create, update, and analyze clinical healthcare data with SMART-on-FHIR authentication support.